Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AIE58681.1 | AIE59545.1 | BMMGA3_00890 | BMMGA3_05585 | Spore germination protein GerD. | Putative spore coat protein regulator protein YlbO. | 0.774 |
AIE58681.1 | AIE60683.1 | BMMGA3_00890 | BMMGA3_11435 | Spore germination protein GerD. | Stage III sporulation protein AH. | 0.767 |
AIE58681.1 | AIE60926.1 | BMMGA3_00890 | BMMGA3_12665 | Spore germination protein GerD. | Stage VI sporulation protein D. | 0.665 |
AIE58681.1 | AIE61604.1 | BMMGA3_00890 | BMMGA3_16255 | Spore germination protein GerD. | Transcription factor, RsfA family protein. | 0.774 |
AIE58681.1 | AIE61608.1 | BMMGA3_00890 | BMMGA3_16275 | Spore germination protein GerD. | Spore coat protein GerQ; Essential for the localization of CwlJ in the spore coat and for spore germination triggered by calcium and dipicolinic acid (DPA). Its assembly into the spore coat is dependent on the coat morphogenetic proteins CotE and SpoIVA. | 0.757 |
AIE58681.1 | cotE | BMMGA3_00890 | BMMGA3_06530 | Spore germination protein GerD. | Spore coat protein E. | 0.774 |
AIE58681.1 | cwlJ | BMMGA3_00890 | BMMGA3_02890 | Spore germination protein GerD. | Cell wall hydrolase CwlJ. | 0.679 |
AIE58681.1 | ydcC | BMMGA3_00890 | BMMGA3_01285 | Spore germination protein GerD. | Sporulation protein YdcC. | 0.772 |
AIE58681.1 | yhbB | BMMGA3_00890 | BMMGA3_03700 | Spore germination protein GerD. | Putative protein YhbB. | 0.738 |
AIE59545.1 | AIE58681.1 | BMMGA3_05585 | BMMGA3_00890 | Putative spore coat protein regulator protein YlbO. | Spore germination protein GerD. | 0.774 |
AIE59545.1 | AIE60683.1 | BMMGA3_05585 | BMMGA3_11435 | Putative spore coat protein regulator protein YlbO. | Stage III sporulation protein AH. | 0.739 |
AIE59545.1 | AIE60926.1 | BMMGA3_05585 | BMMGA3_12665 | Putative spore coat protein regulator protein YlbO. | Stage VI sporulation protein D. | 0.571 |
AIE59545.1 | AIE61608.1 | BMMGA3_05585 | BMMGA3_16275 | Putative spore coat protein regulator protein YlbO. | Spore coat protein GerQ; Essential for the localization of CwlJ in the spore coat and for spore germination triggered by calcium and dipicolinic acid (DPA). Its assembly into the spore coat is dependent on the coat morphogenetic proteins CotE and SpoIVA. | 0.767 |
AIE59545.1 | cotE | BMMGA3_05585 | BMMGA3_06530 | Putative spore coat protein regulator protein YlbO. | Spore coat protein E. | 0.778 |
AIE59545.1 | cwlJ | BMMGA3_05585 | BMMGA3_02890 | Putative spore coat protein regulator protein YlbO. | Cell wall hydrolase CwlJ. | 0.748 |
AIE59545.1 | ydcC | BMMGA3_05585 | BMMGA3_01285 | Putative spore coat protein regulator protein YlbO. | Sporulation protein YdcC. | 0.771 |
AIE59545.1 | yhbB | BMMGA3_05585 | BMMGA3_03700 | Putative spore coat protein regulator protein YlbO. | Putative protein YhbB. | 0.727 |
AIE60683.1 | AIE58681.1 | BMMGA3_11435 | BMMGA3_00890 | Stage III sporulation protein AH. | Spore germination protein GerD. | 0.767 |
AIE60683.1 | AIE59545.1 | BMMGA3_11435 | BMMGA3_05585 | Stage III sporulation protein AH. | Putative spore coat protein regulator protein YlbO. | 0.739 |
AIE60683.1 | AIE60926.1 | BMMGA3_11435 | BMMGA3_12665 | Stage III sporulation protein AH. | Stage VI sporulation protein D. | 0.744 |
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