STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIE59875.1Competence protein CoiA-like family. (148 aa)    
Predicted Functional Partners:
AIE59874.1
Helicase domain protein.
       0.541
comC
Type 4 prepilin-like proteins leader peptide-processing enzyme.
   
    0.510
AIE60812.1
Hypothetical protein.
   
  
 0.482
AIE59872.1
PglZ domain family.
  
    0.456
AIE59873.1
Hypothetical protein.
       0.447
AIE60810.1
DNA internalization-related competence protein ComEC/Rec2.
  
  
 0.444
cinA
Putative competence-damage inducible protein; Belongs to the CinA family.
      
 0.424
Your Current Organism:
Bacillus methanolicus MGA3
NCBI taxonomy Id: 796606
Other names: B. methanolicus MGA3, Bacillus methanolicus str. MGA3, Bacillus methanolicus strain MGA3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.