STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ypjAPutative protein YpjA. (198 aa)    
Predicted Functional Partners:
pcrB
Heptaprenylglyceryl phosphate synthase; Prenyltransferase that catalyzes in vivo the transfer of the heptaprenyl moiety of heptaprenyl pyrophosphate (HepPP; 35 carbon atoms) to the C3 hydroxyl of sn-glycerol-1-phosphate (G1P), producing heptaprenylglyceryl phosphate (HepGP). This reaction is an ether-bond- formation step in the biosynthesis of archaea-type G1P-based membrane lipids found in Bacillales.
  
     0.757
yvoF
Putative acetyltransferase YvoF.
 
     0.701
AIE60530.1
Sporulation protein YpjB.
  
    0.700
AIE60090.1
Hypothetical protein.
  
     0.667
qcrC
Menaquinol-cytochrome c reductase cytochrome b/c subunit; Component of the menaquinol-cytochrome c reductase complex.
 
     0.659
AIE60583.1
Hypothetical protein.
  
     0.644
AIE61064.1
UPF0354-like protein; Belongs to the UPF0354 family.
  
     0.624
AIE59733.1
Hypothetical protein; Belongs to the UPF0342 family.
  
     0.566
qcrB
Menaquinol-cytochrome c reductase cytochrome b subunit.
 
     0.564
cphA
Cyanophycin synthetase.
   
    0.536
Your Current Organism:
Bacillus methanolicus MGA3
NCBI taxonomy Id: 796606
Other names: B. methanolicus MGA3, Bacillus methanolicus str. MGA3, Bacillus methanolicus strain MGA3
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