Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AIE60566.1 | cmk | BMMGA3_10850 | BMMGA3_10855 | 1-acyl-sn-glycerol-3-phosphate acyltransferase. | Cytidylate kinase. | 0.980 |
AIE60566.1 | ypfD | BMMGA3_10850 | BMMGA3_10845 | 1-acyl-sn-glycerol-3-phosphate acyltransferase. | 30S ribosomal protein S1. | 0.550 |
AIE60699.1 | cmk | BMMGA3_11515 | BMMGA3_10855 | Ribonucleotide-diphosphate reductase subunit alpha; Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and/or for immediate growth after restoration of oxygen. | Cytidylate kinase. | 0.921 |
AIE60699.1 | ndk | BMMGA3_11515 | BMMGA3_10755 | Ribonucleotide-diphosphate reductase subunit alpha; Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and/or for immediate growth after restoration of oxygen. | Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | 0.915 |
AIE60699.1 | nrdAB | BMMGA3_11515 | BMMGA3_09290 | Ribonucleotide-diphosphate reductase subunit alpha; Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and/or for immediate growth after restoration of oxygen. | Ribonucleotide-diphosphate reductase subunit alpha; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. | 0.907 |
AIE60699.1 | nrdB | BMMGA3_11515 | BMMGA3_09295 | Ribonucleotide-diphosphate reductase subunit alpha; Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and/or for immediate growth after restoration of oxygen. | Ribonucleoside-diphosphate reductase subunit beta; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides; Belongs to the ribonucleoside diphosphate reductase small chain family. | 0.993 |
aroA | cmk | BMMGA3_10720 | BMMGA3_10855 | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | Cytidylate kinase. | 0.927 |
aroA | ndk | BMMGA3_10720 | BMMGA3_10755 | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | 0.427 |
cmk | AIE60566.1 | BMMGA3_10855 | BMMGA3_10850 | Cytidylate kinase. | 1-acyl-sn-glycerol-3-phosphate acyltransferase. | 0.980 |
cmk | AIE60699.1 | BMMGA3_10855 | BMMGA3_11515 | Cytidylate kinase. | Ribonucleotide-diphosphate reductase subunit alpha; Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and/or for immediate growth after restoration of oxygen. | 0.921 |
cmk | aroA | BMMGA3_10855 | BMMGA3_10720 | Cytidylate kinase. | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | 0.927 |
cmk | dck | BMMGA3_10855 | BMMGA3_00100 | Cytidylate kinase. | Deoxyadenosine/deoxycytidine kinase. | 0.911 |
cmk | der | BMMGA3_10855 | BMMGA3_10810 | Cytidylate kinase. | GTPase Der; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family. | 0.981 |
cmk | ndk | BMMGA3_10855 | BMMGA3_10755 | Cytidylate kinase. | Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | 0.934 |
cmk | nrdAB | BMMGA3_10855 | BMMGA3_09290 | Cytidylate kinase. | Ribonucleotide-diphosphate reductase subunit alpha; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. | 0.921 |
cmk | nrdB | BMMGA3_10855 | BMMGA3_09295 | Cytidylate kinase. | Ribonucleoside-diphosphate reductase subunit beta; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides; Belongs to the ribonucleoside diphosphate reductase small chain family. | 0.931 |
cmk | udk | BMMGA3_10855 | BMMGA3_12210 | Cytidylate kinase. | Uridine kinase. | 0.929 |
cmk | ypfD | BMMGA3_10855 | BMMGA3_10845 | Cytidylate kinase. | 30S ribosomal protein S1. | 0.960 |
dck | cmk | BMMGA3_00100 | BMMGA3_10855 | Deoxyadenosine/deoxycytidine kinase. | Cytidylate kinase. | 0.911 |
der | cmk | BMMGA3_10810 | BMMGA3_10855 | GTPase Der; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family. | Cytidylate kinase. | 0.981 |
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