Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AIE60569.1 | prsW | BMMGA3_10865 | BMMGA3_10880 | Putative glycosyltransferase. | Protease PrsW; Involved in the degradation of specific anti-sigma factors. Belongs to the protease PrsW family. | 0.411 |
AIE60569.1 | sleB | BMMGA3_10865 | BMMGA3_10875 | Putative glycosyltransferase. | Spore cortex-lytic enzyme. | 0.640 |
AIE60569.1 | ypeB | BMMGA3_10865 | BMMGA3_10870 | Putative glycosyltransferase. | Sporulation protein YpeB. | 0.644 |
ansA | prsW | BMMGA3_10885 | BMMGA3_10880 | L-asparaginase. | Protease PrsW; Involved in the degradation of specific anti-sigma factors. Belongs to the protease PrsW family. | 0.550 |
ansA | sleB | BMMGA3_10885 | BMMGA3_10875 | L-asparaginase. | Spore cortex-lytic enzyme. | 0.434 |
ansA | ypdA | BMMGA3_10885 | BMMGA3_10890 | L-asparaginase. | Putative protein YpdA. | 0.800 |
ansA | ypeB | BMMGA3_10885 | BMMGA3_10870 | L-asparaginase. | Sporulation protein YpeB. | 0.429 |
hepS | prsW | BMMGA3_10770 | BMMGA3_10880 | Heptaprenyl diphosphate synthase component I. | Protease PrsW; Involved in the degradation of specific anti-sigma factors. Belongs to the protease PrsW family. | 0.470 |
hepS | rsiW | BMMGA3_10770 | BMMGA3_01000 | Heptaprenyl diphosphate synthase component I. | Anti-sigma-W factor RsiW. | 0.638 |
prsW | AIE60569.1 | BMMGA3_10880 | BMMGA3_10865 | Protease PrsW; Involved in the degradation of specific anti-sigma factors. Belongs to the protease PrsW family. | Putative glycosyltransferase. | 0.411 |
prsW | ansA | BMMGA3_10880 | BMMGA3_10885 | Protease PrsW; Involved in the degradation of specific anti-sigma factors. Belongs to the protease PrsW family. | L-asparaginase. | 0.550 |
prsW | hepS | BMMGA3_10880 | BMMGA3_10770 | Protease PrsW; Involved in the degradation of specific anti-sigma factors. Belongs to the protease PrsW family. | Heptaprenyl diphosphate synthase component I. | 0.470 |
prsW | rsiW | BMMGA3_10880 | BMMGA3_01000 | Protease PrsW; Involved in the degradation of specific anti-sigma factors. Belongs to the protease PrsW family. | Anti-sigma-W factor RsiW. | 0.623 |
prsW | sleB | BMMGA3_10880 | BMMGA3_10875 | Protease PrsW; Involved in the degradation of specific anti-sigma factors. Belongs to the protease PrsW family. | Spore cortex-lytic enzyme. | 0.675 |
prsW | ypdA | BMMGA3_10880 | BMMGA3_10890 | Protease PrsW; Involved in the degradation of specific anti-sigma factors. Belongs to the protease PrsW family. | Putative protein YpdA. | 0.550 |
prsW | ypeB | BMMGA3_10880 | BMMGA3_10870 | Protease PrsW; Involved in the degradation of specific anti-sigma factors. Belongs to the protease PrsW family. | Sporulation protein YpeB. | 0.581 |
prsW | yshE | BMMGA3_10880 | BMMGA3_12885 | Protease PrsW; Involved in the degradation of specific anti-sigma factors. Belongs to the protease PrsW family. | UPF0719 transmembrane protein. | 0.639 |
rsiW | hepS | BMMGA3_01000 | BMMGA3_10770 | Anti-sigma-W factor RsiW. | Heptaprenyl diphosphate synthase component I. | 0.638 |
rsiW | prsW | BMMGA3_01000 | BMMGA3_10880 | Anti-sigma-W factor RsiW. | Protease PrsW; Involved in the degradation of specific anti-sigma factors. Belongs to the protease PrsW family. | 0.623 |
rsiW | yshE | BMMGA3_01000 | BMMGA3_12885 | Anti-sigma-W factor RsiW. | UPF0719 transmembrane protein. | 0.771 |
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