STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIE60730.1Hypothetical protein. (69 aa)    
Predicted Functional Partners:
glcK
Glucokinase.
  
    0.801
yqgS
Lipoteichoic acid synthase-like YqgS; Belongs to the LTA synthase family.
 
     0.736
AIE60731.1
Hypothetical protein.
 
     0.621
ltaS2
Lipoteichoic acid synthase 2; Belongs to the LTA synthase family.
 
     0.580
AIE60727.1
Gamma-D-glutamyl-L-diamino acid endopeptidase 1.
 
     0.520
AIE60420.1
Hypothetical protein; Belongs to the UPF0346 family.
  
     0.498
AIE61556.1
ATP synthase F0 subunit I.
  
     0.491
AIE61670.1
Hypothetical protein.
  
     0.483
rpsK
30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family.
   
    0.440
AIE59477.1
CBS domain protein.
  
     0.419
Your Current Organism:
Bacillus methanolicus MGA3
NCBI taxonomy Id: 796606
Other names: B. methanolicus MGA3, Bacillus methanolicus str. MGA3, Bacillus methanolicus strain MGA3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.