Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AIE59027.1 | udk | BMMGA3_02815 | BMMGA3_12210 | Hypothetical protein. | Uridine kinase. | 0.958 |
AIE60194.1 | cmk | BMMGA3_08970 | BMMGA3_10855 | Orotidine 5'-phosphate decarboxylase. | Cytidylate kinase. | 0.602 |
AIE60194.1 | pyrF | BMMGA3_08970 | BMMGA3_05820 | Orotidine 5'-phosphate decarboxylase. | Orotidine 5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily. | 0.900 |
AIE60194.1 | pyrH | BMMGA3_08970 | BMMGA3_06265 | Orotidine 5'-phosphate decarboxylase. | Uridylate kinase; Catalyzes the reversible phosphorylation of UMP to UDP. | 0.919 |
AIE60194.1 | pyrR | BMMGA3_08970 | BMMGA3_05780 | Orotidine 5'-phosphate decarboxylase. | Bifunctional protein PyrR; Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant; Belongs to the purine/pyrimidine phosphoribosyltransferase family. PyrR subfamily. | 0.974 |
AIE60194.1 | udk | BMMGA3_08970 | BMMGA3_12210 | Orotidine 5'-phosphate decarboxylase. | Uridine kinase. | 0.919 |
AIE60194.1 | upp | BMMGA3_08970 | BMMGA3_16035 | Orotidine 5'-phosphate decarboxylase. | Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate. | 0.929 |
AIE60783.1 | pdp | BMMGA3_11940 | BMMGA3_11090 | Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. | Pyrimidine-nucleoside phosphorylase. | 0.993 |
AIE60783.1 | udk | BMMGA3_11940 | BMMGA3_12210 | Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. | Uridine kinase. | 0.926 |
AIE60783.1 | upp | BMMGA3_11940 | BMMGA3_16035 | Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. | Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate. | 0.495 |
cmk | AIE60194.1 | BMMGA3_10855 | BMMGA3_08970 | Cytidylate kinase. | Orotidine 5'-phosphate decarboxylase. | 0.602 |
cmk | pyrF | BMMGA3_10855 | BMMGA3_05820 | Cytidylate kinase. | Orotidine 5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily. | 0.602 |
cmk | pyrH | BMMGA3_10855 | BMMGA3_06265 | Cytidylate kinase. | Uridylate kinase; Catalyzes the reversible phosphorylation of UMP to UDP. | 0.438 |
cmk | pyrR | BMMGA3_10855 | BMMGA3_05780 | Cytidylate kinase. | Bifunctional protein PyrR; Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant; Belongs to the purine/pyrimidine phosphoribosyltransferase family. PyrR subfamily. | 0.602 |
cmk | udk | BMMGA3_10855 | BMMGA3_12210 | Cytidylate kinase. | Uridine kinase. | 0.929 |
cmk | upp | BMMGA3_10855 | BMMGA3_16035 | Cytidylate kinase. | Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate. | 0.600 |
pdp | AIE60783.1 | BMMGA3_11090 | BMMGA3_11940 | Pyrimidine-nucleoside phosphorylase. | Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. | 0.993 |
pdp | pyrR | BMMGA3_11090 | BMMGA3_05780 | Pyrimidine-nucleoside phosphorylase. | Bifunctional protein PyrR; Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant; Belongs to the purine/pyrimidine phosphoribosyltransferase family. PyrR subfamily. | 0.916 |
pdp | udk | BMMGA3_11090 | BMMGA3_12210 | Pyrimidine-nucleoside phosphorylase. | Uridine kinase. | 0.926 |
pdp | upp | BMMGA3_11090 | BMMGA3_16035 | Pyrimidine-nucleoside phosphorylase. | Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate. | 0.956 |
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