STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIE61038.1Hypothetical protein. (68 aa)    
Predicted Functional Partners:
AIE59366.1
Stage V sporulation protein AC.
  
  
 0.770
AIE58587.1
Sporulation protein YabP.
  
     0.762
spoVAF
Stage V sporulation protein AF.
  
     0.757
gpr
Germination protease; Initiates the rapid degradation of small, acid-soluble proteins during spore germination; Belongs to the peptidase A25 family.
  
  
 0.751
AIE59368.1
Stage V sporulation protein AE.
  
    0.742
spoVAD
Stage V sporulation protein AD.
  
    0.713
cotE
Spore coat protein E.
  
  
 0.713
cwlJ
Cell wall hydrolase CwlJ.
  
    0.699
sigE
RNA polymerase sigma-35 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
  
     0.699
AIE61608.1
Spore coat protein GerQ; Essential for the localization of CwlJ in the spore coat and for spore germination triggered by calcium and dipicolinic acid (DPA). Its assembly into the spore coat is dependent on the coat morphogenetic proteins CotE and SpoIVA.
  
    0.698
Your Current Organism:
Bacillus methanolicus MGA3
NCBI taxonomy Id: 796606
Other names: B. methanolicus MGA3, Bacillus methanolicus str. MGA3, Bacillus methanolicus strain MGA3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.