Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AIE59573.1 | AIE61120.1 | BMMGA3_05725 | BMMGA3_13650 | Hypothetical protein. | Hypothetical protein. | 0.518 |
AIE59573.1 | spoIIAB | BMMGA3_05725 | BMMGA3_11075 | Hypothetical protein. | Anti-sigma F factor; Binds to sigma F and blocks its ability to form an RNA polymerase holoenzyme (E-sigma F). Phosphorylates SpoIIAA on a serine residue. This phosphorylation may enable SpoIIAA to act as an anti- anti-sigma factor that counteracts SpoIIAB and thus releases sigma F from inhibition. | 0.751 |
AIE59573.1 | spoIIID | BMMGA3_05725 | BMMGA3_15865 | Hypothetical protein. | Stage III sporulation protein D. | 0.754 |
AIE59573.1 | spoIVA | BMMGA3_05725 | BMMGA3_10790 | Hypothetical protein. | Stage IV sporulation protein A; ATPase. Has a role at an early stage in the morphogenesis of the spore coat. | 0.769 |
AIE59573.1 | spoVAD | BMMGA3_05725 | BMMGA3_04645 | Hypothetical protein. | Stage V sporulation protein AD. | 0.756 |
AIE61119.1 | AIE61120.1 | BMMGA3_13645 | BMMGA3_13650 | Hypothetical protein. | Hypothetical protein. | 0.980 |
AIE61119.1 | AIE61608.1 | BMMGA3_13645 | BMMGA3_16275 | Hypothetical protein. | Spore coat protein GerQ; Essential for the localization of CwlJ in the spore coat and for spore germination triggered by calcium and dipicolinic acid (DPA). Its assembly into the spore coat is dependent on the coat morphogenetic proteins CotE and SpoIVA. | 0.523 |
AIE61119.1 | cotE | BMMGA3_13645 | BMMGA3_06530 | Hypothetical protein. | Spore coat protein E. | 0.606 |
AIE61119.1 | cotJC | BMMGA3_13645 | BMMGA3_13655 | Hypothetical protein. | Protein CotJC. | 0.971 |
AIE61119.1 | spoIIID | BMMGA3_13645 | BMMGA3_15865 | Hypothetical protein. | Stage III sporulation protein D. | 0.418 |
AIE61120.1 | AIE59573.1 | BMMGA3_13650 | BMMGA3_05725 | Hypothetical protein. | Hypothetical protein. | 0.518 |
AIE61120.1 | AIE61119.1 | BMMGA3_13650 | BMMGA3_13645 | Hypothetical protein. | Hypothetical protein. | 0.980 |
AIE61120.1 | AIE61608.1 | BMMGA3_13650 | BMMGA3_16275 | Hypothetical protein. | Spore coat protein GerQ; Essential for the localization of CwlJ in the spore coat and for spore germination triggered by calcium and dipicolinic acid (DPA). Its assembly into the spore coat is dependent on the coat morphogenetic proteins CotE and SpoIVA. | 0.494 |
AIE61120.1 | cotE | BMMGA3_13650 | BMMGA3_06530 | Hypothetical protein. | Spore coat protein E. | 0.493 |
AIE61120.1 | cotJC | BMMGA3_13650 | BMMGA3_13655 | Hypothetical protein. | Protein CotJC. | 0.987 |
AIE61120.1 | rsmB | BMMGA3_13650 | BMMGA3_05880 | Hypothetical protein. | Ribosomal RNA small subunit methyltransferase B; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | 0.495 |
AIE61120.1 | spoIIAB | BMMGA3_13650 | BMMGA3_11075 | Hypothetical protein. | Anti-sigma F factor; Binds to sigma F and blocks its ability to form an RNA polymerase holoenzyme (E-sigma F). Phosphorylates SpoIIAA on a serine residue. This phosphorylation may enable SpoIIAA to act as an anti- anti-sigma factor that counteracts SpoIIAB and thus releases sigma F from inhibition. | 0.477 |
AIE61120.1 | spoIIID | BMMGA3_13650 | BMMGA3_15865 | Hypothetical protein. | Stage III sporulation protein D. | 0.663 |
AIE61120.1 | spoIVA | BMMGA3_13650 | BMMGA3_10790 | Hypothetical protein. | Stage IV sporulation protein A; ATPase. Has a role at an early stage in the morphogenesis of the spore coat. | 0.555 |
AIE61120.1 | spoVAD | BMMGA3_13650 | BMMGA3_04645 | Hypothetical protein. | Stage V sporulation protein AD. | 0.564 |
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