Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AIE61013.1 | yutG | BMMGA3_13115 | BMMGA3_14235 | Hypothetical protein. | Putative protein YutG. | 0.415 |
AIE61204.1 | yutG | BMMGA3_14230 | BMMGA3_14235 | Spore coat protein S. | Putative protein YutG. | 0.582 |
cinA | pgsA | BMMGA3_06485 | BMMGA3_06480 | Putative competence-damage inducible protein; Belongs to the CinA family. | CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. | 0.988 |
cinA | yutG | BMMGA3_06485 | BMMGA3_14235 | Putative competence-damage inducible protein; Belongs to the CinA family. | Putative protein YutG. | 0.400 |
pgsA | cinA | BMMGA3_06480 | BMMGA3_06485 | CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. | Putative competence-damage inducible protein; Belongs to the CinA family. | 0.988 |
pgsA | yutG | BMMGA3_06480 | BMMGA3_14235 | CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. | Putative protein YutG. | 0.690 |
ribBA | ribD | BMMGA3_09895 | BMMGA3_09905 | Riboflavin biosynthesis protein RibBA; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family. | Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. | 0.999 |
ribBA | yutG | BMMGA3_09895 | BMMGA3_14235 | Riboflavin biosynthesis protein RibBA; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family. | Putative protein YutG. | 0.558 |
ribD | ribBA | BMMGA3_09905 | BMMGA3_09895 | Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. | Riboflavin biosynthesis protein RibBA; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family. | 0.999 |
ribD | yutG | BMMGA3_09905 | BMMGA3_14235 | Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. | Putative protein YutG. | 0.505 |
yutG | AIE61013.1 | BMMGA3_14235 | BMMGA3_13115 | Putative protein YutG. | Hypothetical protein. | 0.415 |
yutG | AIE61204.1 | BMMGA3_14235 | BMMGA3_14230 | Putative protein YutG. | Spore coat protein S. | 0.582 |
yutG | cinA | BMMGA3_14235 | BMMGA3_06485 | Putative protein YutG. | Putative competence-damage inducible protein; Belongs to the CinA family. | 0.400 |
yutG | pgsA | BMMGA3_14235 | BMMGA3_06480 | Putative protein YutG. | CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. | 0.690 |
yutG | ribBA | BMMGA3_14235 | BMMGA3_09895 | Putative protein YutG. | Riboflavin biosynthesis protein RibBA; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family. | 0.558 |
yutG | ribD | BMMGA3_14235 | BMMGA3_09905 | Putative protein YutG. | Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. | 0.505 |