STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIE61209.1Hypothetical protein. (88 aa)    
Predicted Functional Partners:
AIE61210.1
Hypothetical protein.
 
     0.706
AIE61207.1
Hypothetical protein.
 
     0.672
korA
2-oxoglutarate synthase subunit alpha.
  
     0.671
korB
2-oxoglutarate synthase subunit beta.
  
     0.616
fumA
Fumarate hydratase class I, aerobic; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
  
     0.591
AIE61025.1
Hypothetical protein.
  
     0.581
AIE61208.1
Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains).
       0.580
AIE59229.1
Hypothetical protein.
  
     0.524
AIE61338.1
Cytochrome c-551.
  
     0.518
yfkA
Putative protein YfkA.
  
    0.464
Your Current Organism:
Bacillus methanolicus MGA3
NCBI taxonomy Id: 796606
Other names: B. methanolicus MGA3, Bacillus methanolicus str. MGA3, Bacillus methanolicus strain MGA3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.