STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
flgECOG1749 Flagellar hook protein FlgE. (398 aa)    
Predicted Functional Partners:
flgC
COG1558 Flagellar basal body rod protein; Belongs to the flagella basal body rod proteins family.
 
 0.997
EFP95045.1
COG4787 Flagellar basal body rod protein; Belongs to the flagella basal body rod proteins family.
 
 
 0.996
flgI
Flagellar basal body P-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
 
 
 0.994
flgD
Flagellar basal body rod modification protein; Required for flagellar hook formation. May act as a scaffolding protein.
 
 
 0.994
flgH
Flagellar basal body L-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
 
 
 0.993
EFP95044.1
COG4786 Flagellar basal body rod protein; Belongs to the flagella basal body rod proteins family.
 
0.992
flgB
Flagellar basal body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
 
 
 0.992
flgC-2
COG1558 Flagellar basal body rod protein; Belongs to the flagella basal body rod proteins family.
 
 0.992
fliF
Flagellar MS-ring protein; The M ring may be actively involved in energy transduction. Belongs to the FliF family.
 
 
 0.987
flgF
COG4787 Flagellar basal body rod protein.
 
 
 0.987
Your Current Organism:
Vibrio caribbeanicus
NCBI taxonomy Id: 796620
Other names: V. caribbeanicus ATCC BAA-2122, Vibrio caribbeanicus ATCC BAA-2122, Vibrio caribbenthicus ATCC BAA-2122, Vibrio sp. N384, Vibrio sp. SP2010
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.