STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slc1a3Solute carrier family 1 member 3. (543 aa)    
Predicted Functional Partners:
Slc6a1
Solute carrier family 6 member 1.
  
 
 0.879
Slc6a5
Solute carrier family 6 member 5.
    
 0.861
Slc6a7
Solute carrier family 6 member 7.
    
 0.856
Slc6a2
Solute carrier family 6 member 2.
    
 0.848
Slc1a1
Solute carrier family 1 member 1.
  
  
0.845
Slc1a2
Solute carrier family 1 member 2.
  
 
 
0.844
Slc1a6
Solute carrier family 1 member 6.
  
  
 
0.839
Slc6a4
Solute carrier family 6 member 4.
    
 0.837
Slc1a7
Solute carrier family 1 member 7.
  
  
 
0.833
Slc6a14
Solute carrier family 6 member 14.
    
 0.820
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.