STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Atg5Autophagy related 5. (275 aa)    
Predicted Functional Partners:
Atg12
Autophagy related 12.
   
 0.999
Atg3
Autophagy related 3.
   
 0.998
Atg16l1
Autophagy related 16 like 1.
   
 0.998
Atg16l2
Autophagy related 16 like 2.
   
 0.993
Wipi1
WD repeat domain, phosphoinositide interacting 1.
    
 0.977
Wipi2
WD repeat domain, phosphoinositide interacting 2.
    
 0.973
Atg7
Autophagy related 7.
    
 0.970
Ulk1
Unc-51 like autophagy activating kinase 1.
    
 
 0.966
Mavs
Mitochondrial antiviral signaling protein.
    
 0.960
Ulk2
Unc-51 like autophagy activating kinase 2.
    
 
 0.956
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.