STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101988992Ankyrin repeat domain-containing protein 7-like. (289 aa)    
Predicted Functional Partners:
Ift88
Intraflagellar transport 88.
   
 0.704
Ift52
Intraflagellar transport 52.
    
 0.701
Ikbkb
Inhibitor of kappaB kinase beta.
   
 0.700
Chuk
Component of inhibitor of nuclear factor kappa B kinase complex.
   
 0.700
Ift22
Intraflagellar transport 22.
    
 0.699
Nfkbib
NFKB inhibitor beta.
  
 
  0.694
Ift57
Intraflagellar transport 57.
    
 0.692
Relb
RELB proto-oncogene, NF-kB subunit.
   
 0.691
Rel
Reticuloendotheliosis oncogene.
   
 0.691
Ift80
Intraflagellar transport 80.
   
 0.691
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.