STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Trim45Tripartite motif containing 45. (580 aa)    
Predicted Functional Partners:
LOC101978981
Ubiquitin-like.
    
 0.714
Icos
Inducible T cell costimulator.
    
  0.602
ENSMOCP00000020359
annotation not available
    
 0.601
Gas7
Growth arrest specific 7.
    
  0.581
Tmem173
Stimulator of interferon response cGAMP interactor 1.
    
  0.569
Smad4
SMAD family member 4.
    
  0.547
Sorbs1
Sorbin and SH3 domain containing 1.
      
 0.545
Ddx41
DEAD-box helicase 41.
    
 0.541
Pycard
PYD and CARD domain containing.
    
  0.531
Tonsl
Tonsoku like, DNA repair protein.
    
  0.527
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.