STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CadpsCa2+-dependent secretion activator. (1361 aa)    
Predicted Functional Partners:
Rims2
Regulating synaptic membrane exocytosis 2.
   
  
 0.577
Pcsk2
Proprotein convertase subtilisin/kexin type 2.
   
  
 0.446
Rasl10b
RAS like family 10 member B.
      
 0.437
Lemd2
LEM domain containing 2.
      
 0.436
Gabra3
Gamma-aminobutyric acid type A receptor alpha3 subunit.
      
 0.434
Pi4kb
Phosphatidylinositol 4-kinase beta.
      
 0.434
Ncs1
Neuronal calcium sensor 1.
      
 0.428
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.