STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Fam81bFamily with sequence similarity 81 member B. (368 aa)    
Predicted Functional Partners:
Wdr38
WD repeat domain 38.
   
    0.801
Rsph14
Radial spoke head 14 homolog.
   
  
 0.801
Erich2
Glutamate rich 2.
   
    0.792
Gm45717
Interferon induced transmembrane protein 5.
   
    0.590
Ctsd
Cathepsin D.
   
    0.590
Napsa
Napsin A aspartic peptidase.
   
    0.590
Ifitm3
Interferon-induced transmembrane protein 3.
   
    0.590
Ifitm10
Interferon induced transmembrane protein 10.
   
    0.590
LOC101992208
Interferon-induced transmembrane protein 1-like.
   
    0.590
Poc1a
POC1 centriolar protein A.
   
    0.555
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.