STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CatsperdCation channel sperm associated auxiliary subunit delta. (691 aa)    
Predicted Functional Partners:
ENSMOCP00000006246
annotation not available
   
 0.984
Catsper2
Cation channel sperm associated 2.
  
 
 0.982
Catsper3
Cation channel sperm associated 3.
    
 0.980
Catsper1
Cation channel sperm associated 1.
    
 0.960
Catsper4
Cation channel sperm associated 4.
    
 0.956
Tmem238
Transmembrane protein 238.
   
 0.936
Tmem238l
Transmembrane protein 238 like.
   
 0.936
ENSMOCP00000019885
annotation not available
    
 
 0.919
Catsperz
Catsper channel auxiliary subunit zeta.
    
 
 0.868
Efcab9
EF-hand calcium binding domain 9.
    
 0.855
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.