STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tmem198bTransmembrane protein 198-like. (341 aa)    
Predicted Functional Partners:
Apaf1
Apoptotic peptidase activating factor 1.
    
 0.975
Appl2
Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 2.
    
 0.888
Appl1
Adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1.
    
 0.888
Birc6
Baculoviral IAP repeat containing 6.
   
 0.877
Mib2
Mindbomb E3 ubiquitin protein ligase 2.
    
 0.779
Cenpn
Centromere protein N.
   
 0.779
Ripk4
Receptor interacting serine/threonine kinase 4.
    
 0.771
Birc7
Baculoviral IAP repeat containing 7.
   
 0.753
Naip
NLR family apoptosis inhibitory protein.
   
 0.753
Birc2
Baculoviral IAP repeat containing 2.
   
 0.753
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.