STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slc35c1Solute carrier family 35 member C1. (365 aa)    
Predicted Functional Partners:
Slc35c2
Solute carrier family 35 member C2.
   
  
 0.611
Slc35b4
Solute carrier family 35 member B4.
      
 0.610
Mogs
Mannosyl-oligosaccharide glucosidase.
   
  
 0.605
Fut8
Fucosyltransferase 8.
      
 0.605
Slc35g1
Solute carrier family 35 member G1.
   
  
 0.598
Slc35b2
Solute carrier family 35 member B2.
   
  
 0.574
Gmds
GDP-mannose 4,6-dehydratase.
      
 0.567
Slc35e3
Solute carrier family 35, member E3.
      
 0.566
Slc35b3
Solute carrier family 35 member B3.
   
  
 0.563
Tmem144
Transmembrane protein 144.
      
 0.526
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.