STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tex30Testis expressed 30. (225 aa)    
Predicted Functional Partners:
Mcrs1
Microspherule protein 1.
   
 0.938
Kansl2
KAT8 regulatory NSL complex subunit 2.
    
 0.935
Phf13
PHD finger protein 13.
    
 0.908
Phf20
PHD finger protein 20.
    
 0.908
ENSMOCP00000010231
annotation not available
    
 0.908
Phf23
PHD finger protein 23.
    
 0.891
Ogt
O-linked N-acetylglucosamine (GlcNAc) transferase.
    
 0.873
Adhfe1
Alcohol dehydrogenase iron containing 1.
    
  0.829
Hcfc2
Host cell factor C2.
    
 0.762
Hcfc1
Host cell factor C1.
    
 0.762
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.