STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSMOCP00000001330annotation not available (307 aa)    
Predicted Functional Partners:
U2af1
U2 small nuclear RNA auxiliary factor 1.
   
 0.977
Cdc5l
Cell division cycle 5 like.
   
 0.972
U2af1l4
U2 small nuclear RNA auxiliary factor 1 like 4.
   
 0.968
Sf1
Splicing factor 1.
   
 
 0.965
Snrpe
Small nuclear ribonucleoprotein polypeptide E.
   
 
 0.958
Sf3b1
Splicing factor 3b, subunit 1.
   
 
 0.957
Sf3b3
Splicing factor 3b subunit 3.
   
 0.957
Zrsr2
Zinc finger CCCH-type, RNA binding motif and serine/arginine rich 2.
   
 0.954
Snrpa1
Small nuclear ribonucleoprotein polypeptide A.
   
 
 0.952
Rbm25
RNA binding motif protein 25.
   
 
0.949
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.