STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tspan6Tetraspanin 6. (245 aa)    
Predicted Functional Partners:
Met
MET proto-oncogene, receptor tyrosine kinase.
    
 0.739
Mst1r
Macrophage stimulating 1 receptor (c-met-related tyrosine kinase).
    
  0.737
Pick1
Protein interacting with PRKCA 1.
     
 0.721
Cd19
CD19 antigen.
    
 0.703
Cd53
CD53 molecule.
     
0.678
Grip2
Glutamate receptor interacting protein 2.
    
 0.632
Pdgfb
Platelet derived growth factor subunit B.
    
 0.553
Ptgfrn
Prostaglandin F2 receptor inhibitor.
    
 
 0.553
Rab14
RAB14, member RAS oncogene family.
    
 0.538
Ifngr1
Interferon gamma receptor 1.
    
  0.521
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.