STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ttc39dTetratricopeptide repeat protein 39B-like. (605 aa)    
Predicted Functional Partners:
Tmbim7
Protein lifeguard 2.
      
 0.465
4921536K21Rik
Chromosome unknown C5orf52 homolog.
      
 0.442
Cyp2ab1
Cytochrome P450, family 2, subfamily ab, polypeptide 1.
   
  
 0.439
Ttc41
Tetratricopeptide repeat protein 41-like.
      
 0.437
Vapb
VAMP associated protein B and C.
    
   0.408
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.