STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Plod3Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3. (741 aa)    
Predicted Functional Partners:
Colgalt1
Collagen beta(1-O)galactosyltransferase 1.
   
0.947
Colgalt2
Collagen beta(1-O)galactosyltransferase 2.
   
0.933
Plod1
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1.
  
0.933
Ehmt2
Euchromatic histone lysine methyltransferase 2.
    
  0.910
Plod2
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 2.
  
 
 
0.898
Ehmt1
Euchromatic histone lysine methyltransferase 1.
    
  0.896
Cercam
Cerebral endothelial cell adhesion molecule.
   
0.878
Suv39h2
Suppressor of variegation 3-9 homolog 2.
    
  0.871
Suv39h1
Suppressor of variegation 3-9 homolog 1.
    
  0.871
Nsd1
Nuclear receptor-binding SET-domain protein 1.
    
 0.870
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.