STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dennd5aDENN domain containing 5A. (1357 aa)    
Predicted Functional Partners:
Rab6b
RAB6B, member RAS oncogene family.
    
 
 0.876
Rab6a
RAB6A, member RAS oncogene family.
    
 
 0.876
Dennd4c
DENN domain containing 4C.
    
 
0.661
Chm
CHM Rab escort protein.
     
 0.623
Rab28
RAB28, member RAS oncogene family.
     
 0.613
Rab13
RAB13, member RAS oncogene family.
     
 0.556
Rab11a
RAB11A, member RAS oncogene family.
     
 0.542
Dennd1a
DENN domain containing 1A.
    
 
 0.541
Dennd3
DENN domain containing 3.
    
 
0.529
Rab36
RAB36, member RAS oncogene family.
    
 
 0.524
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.