Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Brca2 | Pcid2 | ENSMOCP00000000295 | ENSMOCP00000012759 | BRCA2 DNA repair associated. | PCI domain containing 2. | 0.435 |
Brca2 | Psmd14 | ENSMOCP00000000295 | ENSMOCP00000004001 | BRCA2 DNA repair associated. | Proteasome 26S subunit, non-ATPase 14. | 0.511 |
Brca2 | Psmd3 | ENSMOCP00000000295 | ENSMOCP00000022719 | BRCA2 DNA repair associated. | Proteasome 26S subunit, non-ATPase 3. | 0.442 |
Brca2 | Sem1 | ENSMOCP00000000295 | ENSMOCP00000001737 | BRCA2 DNA repair associated. | SEM1, 26S proteasome complex subunit. | 0.994 |
Pcid2 | Brca2 | ENSMOCP00000012759 | ENSMOCP00000000295 | PCI domain containing 2. | BRCA2 DNA repair associated. | 0.435 |
Pcid2 | Psmd3 | ENSMOCP00000012759 | ENSMOCP00000022719 | PCI domain containing 2. | Proteasome 26S subunit, non-ATPase 3. | 0.482 |
Pcid2 | Psmd6 | ENSMOCP00000012759 | ENSMOCP00000001246 | PCI domain containing 2. | Proteasome 26S subunit, non-ATPase 6. | 0.500 |
Pcid2 | Psmd8 | ENSMOCP00000012759 | ENSMOCP00000017775 | PCI domain containing 2. | Proteasome 26S subunit, non-ATPase 8. | 0.441 |
Pcid2 | Sem1 | ENSMOCP00000012759 | ENSMOCP00000001737 | PCI domain containing 2. | SEM1, 26S proteasome complex subunit. | 0.980 |
Psmd12 | Psmd13 | ENSMOCP00000023683 | ENSMOCP00000011987 | Proteasome 26S subunit, non-ATPase 12. | Proteasome 26S subunit, non-ATPase 13. | 0.999 |
Psmd12 | Psmd14 | ENSMOCP00000023683 | ENSMOCP00000004001 | Proteasome 26S subunit, non-ATPase 12. | Proteasome 26S subunit, non-ATPase 14. | 0.999 |
Psmd12 | Psmd3 | ENSMOCP00000023683 | ENSMOCP00000022719 | Proteasome 26S subunit, non-ATPase 12. | Proteasome 26S subunit, non-ATPase 3. | 0.999 |
Psmd12 | Psmd4 | ENSMOCP00000023683 | ENSMOCP00000026167 | Proteasome 26S subunit, non-ATPase 12. | Proteasome 26S subunit, non-ATPase 4. | 0.999 |
Psmd12 | Psmd6 | ENSMOCP00000023683 | ENSMOCP00000001246 | Proteasome 26S subunit, non-ATPase 12. | Proteasome 26S subunit, non-ATPase 6. | 0.999 |
Psmd12 | Psmd7 | ENSMOCP00000023683 | ENSMOCP00000020794 | Proteasome 26S subunit, non-ATPase 12. | Proteasome 26S subunit, non-ATPase 7. | 0.999 |
Psmd12 | Psmd8 | ENSMOCP00000023683 | ENSMOCP00000017775 | Proteasome 26S subunit, non-ATPase 12. | Proteasome 26S subunit, non-ATPase 8. | 0.999 |
Psmd12 | Sem1 | ENSMOCP00000023683 | ENSMOCP00000001737 | Proteasome 26S subunit, non-ATPase 12. | SEM1, 26S proteasome complex subunit. | 0.981 |
Psmd13 | Psmd12 | ENSMOCP00000011987 | ENSMOCP00000023683 | Proteasome 26S subunit, non-ATPase 13. | Proteasome 26S subunit, non-ATPase 12. | 0.999 |
Psmd13 | Psmd14 | ENSMOCP00000011987 | ENSMOCP00000004001 | Proteasome 26S subunit, non-ATPase 13. | Proteasome 26S subunit, non-ATPase 14. | 0.999 |
Psmd13 | Psmd3 | ENSMOCP00000011987 | ENSMOCP00000022719 | Proteasome 26S subunit, non-ATPase 13. | Proteasome 26S subunit, non-ATPase 3. | 0.999 |
page 1 of 5