STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Wdr54WD repeat domain 54. (334 aa)    
Predicted Functional Partners:
Oscp1
Organic solute carrier partner 1.
    
   0.704
Cd99l2
CD99 molecule like 2.
      
 0.540
Itpripl1
ITPRIP like 1.
      
 0.539
Rab12
RAB12, member RAS oncogene family.
    
 0.499
Rasef
RAS and EF-hand domain containing.
    
 0.499
Rab7a
RAB7A, member RAS oncogene family.
    
 0.499
Garem2
GRB2 associated regulator of MAPK1 subtype 2.
    
 0.499
ENSMOCP00000006303
annotation not available
    
 0.499
Rab39b
RAB39B, member RAS oncogene family.
    
 0.499
ENSMOCP00000009025
annotation not available
    
 0.499
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.