STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Atxn1Ataxin 1. (791 aa)    
Predicted Functional Partners:
Cic
Capicua transcriptional repressor.
    
 
 0.970
Kat5
Lysine acetyltransferase 5.
    
 0.911
Atxn1l
Ataxin 1 like.
    
0.897
Rbpjl
Recombination signal binding protein for immunoglobulin kappa J region like.
    
 0.877
LOC101985117
Recombining binding protein suppressor of hairless-like.
    
 0.860
Rbpj
Recombination signal binding protein for immunoglobulin kappa J region.
    
 0.860
Pum1
Pumilio RNA binding family member 1.
     
 0.852
Pum2
Pumilio RNA binding family member 2.
     
 0.846
Ist1
IST1 factor associated with ESCRT-III.
    
 0.802
Kat8
Lysine acetyltransferase 8.
    
 0.802
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.