STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ccn2Cellular communication network factor 2. (345 aa)    
Predicted Functional Partners:
Ccn4
Cellular communication network factor 4.
  
  
 
0.670
Hspg2
Heparan sulfate proteoglycan 2.
    
 
 0.638
ENSMOCP00000009815
annotation not available
   
  
 0.624
Acta2
Actin alpha 2, smooth muscle.
   
 
 0.614
Dcn
Decorin.
   
  
 0.590
Igfbp7
Insulin like growth factor binding protein 7.
   
  
 0.582
Thbs1
Thrombospondin 1.
   
 
 0.571
Smad7
SMAD family member 7.
   
  
 0.565
Edn1
Endothelin 1.
   
  
 0.562
Ntrk1
Neurotrophic receptor tyrosine kinase 1.
      
 0.558
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.