STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sh3tc2SH3 domain and tetratricopeptide repeats 2. (1288 aa)    
Predicted Functional Partners:
Fig4
FIG4 phosphoinositide 5-phosphatase.
      
 0.613
Litaf
Lipopolysaccharide induced TNF factor.
   
  
 0.613
Mtmr2
Myotubularin related protein 2.
      
 0.610
Fgd4
FYVE, RhoGEF and PH domain containing 4.
      
 0.605
Mpz
Myelin protein zero.
      
 0.588
Ap5s1
Adaptor related protein complex 5 subunit sigma 1.
      
 0.555
Ighmbp2
Immunoglobulin mu DNA binding protein 2.
      
 0.542
Sh3tc1
SH3 domain and tetratricopeptide repeats 1.
      
0.528
Zbtb3
Zinc finger and BTB domain containing 3.
      
 0.516
Lrsam1
Leucine rich repeat and sterile alpha motif containing 1.
      
 0.457
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.