STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bms1BMS1 ribosome biogenesis factor. (1284 aa)    
Predicted Functional Partners:
Utp15
UTP15 small subunit processome component.
   
 0.999
Wdr75
WD repeat domain 75.
   
 0.999
Bysl
Bystin like.
   
 
 0.999
Pwp2
PWP2 small subunit processome component.
   
 
 0.999
Utp3
UTP3 small subunit processome component.
   
 
 0.999
Utp18
UTP18 small subunit processome component.
   
 0.999
Nol6
Nucleolar protein 6.
   
 0.999
Rcl1
RNA terminal phosphate cyclase like 1.
   
 0.999
Wdr36
WD repeat domain 36.
   
 
 0.999
Wdr3
WD repeat domain 3.
   
 
 0.999
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.