STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Macroh2a1Core histone macro-H2A.1. (372 aa)    
Predicted Functional Partners:
Mysm1
Myb like, SWIRM and MPN domains 1.
  
 0.998
Kdm6a
Lysine demethylase 6A.
   
 0.934
Kdm6b
Lysine demethylase 6B.
   
 0.931
ENSMOCP00000002600
annotation not available
   
 0.927
Parp1
poly(ADP-ribose) polymerase 1.
    
 
 0.919
Hdac3
Histone deacetylase 3.
   
 0.918
Hdac11
Histone deacetylase 11.
   
 0.915
Glyr1
Glyoxylate reductase 1 homolog.
    
   0.915
Hdac8
Histone deacetylase 8.
   
 0.911
Hdac4
Histone deacetylase 4.
   
 0.908
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.