STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hoxb1Homeobox B1. (297 aa)    
Predicted Functional Partners:
Pbx1
PBX homeobox 1.
    
 0.968
Pbx4
PBX homeobox 4.
    
 0.966
Pbx2
PBX homeobox 2.
    
 0.916
Pbx3
PBX homeobox 3.
    
 0.916
Hoxd1
Homeobox D1.
  
0.874
Hoxa1
Homeobox A1.
   
0.868
Pknox1
PBX/knotted 1 homeobox 1.
    
 0.828
Pknox2
PBX/knotted 1 homeobox 2.
    
 0.794
Meis3
Meis homeobox 3.
   
 0.713
Meis2
Meis homeobox 2.
    
 0.669
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.