STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RtbdnRetbindin. (240 aa)    
Predicted Functional Partners:
Guca2b
Guanylate cyclase activator 2B.
      
 0.566
Gucy1a2
Guanylate cyclase 1 soluble subunit alpha 2.
      
 0.534
Rad18
RAD18 E3 ubiquitin protein ligase.
      
 0.479
Optc
Opticin.
      
 0.443
Kcnb1
Potassium voltage-gated channel subfamily B member 1.
      
 0.436
Best2
Bestrophin 2.
      
 0.435
Fancl
FA complementation group L.
      
 0.416
Rad17
RAD17 checkpoint clamp loader component.
      
 0.404
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.