STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Alkbh5alkB homolog 5, RNA demethylase. (395 aa)    
Predicted Functional Partners:
Fto
FTO alpha-ketoglutarate dependent dioxygenase.
     
 0.892
Afdn
Afadin, adherens junction formation factor.
    
  0.753
Mettl14
Methyltransferase like 14.
   
  
 0.636
Ythdc2
YTH domain containing 2.
     
 0.628
Wtap
WT1 associated protein.
   
  
 0.627
Ythdf1
YTH N6-methyladenosine RNA binding protein 1.
      
 0.611
Ddx46
DEAD (Asp-Glu-Ala-Asp) box polypeptide 46.
     
 0.610
Alkbh1
alkB homolog 1, histone H2A dioxygenase.
      
 0.608
Ythdc1
YTH domain containing 1.
      
 0.605
ENSMOCP00000001962
annotation not available
   
 
 0.578
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.