STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sned1Sushi, nidogen and EGF like domains 1. (1530 aa)    
Predicted Functional Partners:
Fau
FAU ubiquitin like and ribosomal protein S30 fusion.
    
 0.737
Ptk7
Protein tyrosine kinase 7 (inactive).
    
 0.715
Ripk4
Receptor interacting serine/threonine kinase 4.
   
 0.704
Mib2
Mindbomb E3 ubiquitin protein ligase 2.
   
 0.691
Tonsl
Tonsoku like, DNA repair protein.
   
 0.691
Rnasel
Ribonuclease L.
   
 0.687
Bard1
BRCA1 associated RING domain 1.
   
 0.683
Slain2
SLAIN motif family member 2.
    
 0.675
Slf1
SMC5-SMC6 complex localization factor 1.
   
 0.663
Gas7
Growth arrest specific 7.
    
 0.654
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.