STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSMOCP00000003332annotation not available (308 aa)    
Predicted Functional Partners:
Bop1
BOP1 ribosomal biogenesis factor.
   
 
 0.993
Wdr12
WD repeat domain 12.
   
 
 0.992
Ftsj3
FtsJ RNA 2'-O-methyltransferase 3.
   
 
 0.991
Gtpbp4
GTP binding protein 4.
   
 
 0.990
Rpf1
Ribosome production factor 1 homolog.
   
 
 0.990
Ebna1bp2
EBNA1 binding protein 2.
   
 
 0.990
Pes1
Pescadillo ribosomal biogenesis factor 1.
   
 
 0.990
Mrto4
MRT4 homolog, ribosome maturation factor.
   
 
 0.989
Brix1
Biogenesis of ribosomes BRX1.
   
 
 0.989
Mak16
MAK16 homolog.
   
 
 0.984
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.