STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rnf215Ring finger protein 215. (379 aa)    
Predicted Functional Partners:
Rspo2
R-spondin 2.
    
 0.818
Rspo3
R-spondin 3.
    
 0.817
Rspo4
R-spondin 4.
    
 0.807
Rspo1
R-spondin 1.
    
  0.795
LOC101978981
Ubiquitin-like.
    
  0.766
Lgr5
Leucine rich repeat containing G protein-coupled receptor 5.
    
 0.755
Lgr4
Leucine rich repeat containing G protein-coupled receptor 4.
    
 0.755
ENSMOCP00000000250
annotation not available
    
 0.746
LOC101983222
Ubiquitin.
    
 0.746
Kxd1
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
 0.746
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.