STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krt71Keratin, type II cytoskeletal 71. (528 aa)    
Predicted Functional Partners:
Krt27
Keratin 27.
  
0.866
Krt35
Keratin 35.
  
 
0.841
Krtap11-1
Keratin-associated protein 11-1.
   
  
 0.815
Krt72
Keratin, type II cytoskeletal 72.
  
 
 
0.767
LOC102001638
Keratin, type II cuticular Hb5.
  
 
 
0.700
Krtap3-1
Keratin-associated protein 3-1.
   
  
 0.619
Rspo2
R-spondin 2.
      
 0.546
Krt82
Keratin 82.
  
 
 
0.540
Krt25
Keratin 25.
  
 
0.526
Krt28
Keratin, type I cytoskeletal 28.
  
 
0.517
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.