STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ppfia3PTPRF interacting protein alpha 3. (1194 aa)    
Predicted Functional Partners:
Rims2
Regulating synaptic membrane exocytosis 2.
   
 0.992
Ptprf
Protein tyrosine phosphatase receptor type F.
    
 0.978
Ptprd
Protein tyrosine phosphatase receptor type D.
    
 0.964
Ptprs
Protein tyrosine phosphatase receptor type S.
    
 0.920
Cask
Calcium/calmodulin dependent serine protein kinase.
    
 0.917
Diaph2
Diaphanous related formin 2.
    
   0.857
ENSMOCP00000026636
annotation not available
   
 0.856
ENSMOCP00000010751
annotation not available
   
 0.854
ENSMOCP00000025731
annotation not available
   
0.854
Ppp2ca
Protein phosphatase 2 catalytic subunit alpha.
    
   0.853
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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