Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Alx3 | ENSMOCP00000004769 | ENSMOCP00000016681 | ENSMOCP00000004769 | ALX homeobox 3. | annotation not available | 0.832 |
Alx3 | Ldb1 | ENSMOCP00000016681 | ENSMOCP00000004849 | ALX homeobox 3. | LIM domain binding 1. | 0.832 |
Alx3 | Ldb2 | ENSMOCP00000016681 | ENSMOCP00000000759 | ALX homeobox 3. | LIM domain binding 2. | 0.832 |
Alx3 | Lhx3 | ENSMOCP00000016681 | ENSMOCP00000003634 | ALX homeobox 3. | LIM homeobox 3. | 0.888 |
Alx3 | Ssbp2 | ENSMOCP00000016681 | ENSMOCP00000027180 | ALX homeobox 3. | Single stranded DNA binding protein 2. | 0.457 |
Alx3 | Ssbp3 | ENSMOCP00000016681 | ENSMOCP00000012635 | ALX homeobox 3. | Single stranded DNA binding protein 3. | 0.457 |
ENSMOCP00000004769 | Alx3 | ENSMOCP00000004769 | ENSMOCP00000016681 | annotation not available | ALX homeobox 3. | 0.832 |
ENSMOCP00000004769 | Isl1 | ENSMOCP00000004769 | ENSMOCP00000004805 | annotation not available | ISL LIM homeobox 1. | 0.853 |
ENSMOCP00000004769 | Isl2 | ENSMOCP00000004769 | ENSMOCP00000011212 | annotation not available | ISL LIM homeobox 2. | 0.853 |
ENSMOCP00000004769 | Lhx3 | ENSMOCP00000004769 | ENSMOCP00000003634 | annotation not available | LIM homeobox 3. | 0.780 |
ENSMOCP00000004769 | Prop1 | ENSMOCP00000004769 | ENSMOCP00000025676 | annotation not available | PROP paired-like homeobox 1. | 0.685 |
ENSMOCP00000004769 | Prrx1 | ENSMOCP00000004769 | ENSMOCP00000012923 | annotation not available | Paired related homeobox 1. | 0.685 |
ENSMOCP00000004769 | Ssbp2 | ENSMOCP00000004769 | ENSMOCP00000027180 | annotation not available | Single stranded DNA binding protein 2. | 0.769 |
ENSMOCP00000004769 | Ssbp3 | ENSMOCP00000004769 | ENSMOCP00000012635 | annotation not available | Single stranded DNA binding protein 3. | 0.769 |
Isl1 | ENSMOCP00000004769 | ENSMOCP00000004805 | ENSMOCP00000004769 | ISL LIM homeobox 1. | annotation not available | 0.853 |
Isl1 | Ldb1 | ENSMOCP00000004805 | ENSMOCP00000004849 | ISL LIM homeobox 1. | LIM domain binding 1. | 0.928 |
Isl1 | Ldb2 | ENSMOCP00000004805 | ENSMOCP00000000759 | ISL LIM homeobox 1. | LIM domain binding 2. | 0.918 |
Isl1 | Lhx3 | ENSMOCP00000004805 | ENSMOCP00000003634 | ISL LIM homeobox 1. | LIM homeobox 3. | 0.976 |
Isl1 | Ssbp2 | ENSMOCP00000004805 | ENSMOCP00000027180 | ISL LIM homeobox 1. | Single stranded DNA binding protein 2. | 0.873 |
Isl1 | Ssbp3 | ENSMOCP00000004805 | ENSMOCP00000012635 | ISL LIM homeobox 1. | Single stranded DNA binding protein 3. | 0.704 |
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