STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Stambpl1STAM binding protein like 1. (436 aa)    
Predicted Functional Partners:
LOC101978981
Ubiquitin-like.
    
 0.968
Stam2
Signal transducing adaptor molecule 2.
    
 0.968
Kxd1
Ubiquitin A-52 residue ribosomal protein fusion product 1.
   
 0.961
Fau
FAU ubiquitin like and ribosomal protein S30 fusion.
   
 0.958
Psmd6
Proteasome 26S subunit, non-ATPase 6.
   
 0.940
ENSMOCP00000000250
annotation not available
   
 0.935
Psmd13
Proteasome 26S subunit, non-ATPase 13.
   
 0.929
Psmd12
Proteasome 26S subunit, non-ATPase 12.
   
 0.929
LOC101983222
Ubiquitin.
   
 0.918
Psmd4
Proteasome 26S subunit, non-ATPase 4.
   
 0.912
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.