STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sdr39u1Short chain dehydrogenase/reductase family 39U member 1. (309 aa)    
Predicted Functional Partners:
Fech
Ferrochelatase.
  
  
 0.647
Stoml1
Stomatin like 1.
  
  
 0.621
Ncln
Nicalin.
      
 0.550
Nynrin
NYN domain and retroviral integrase containing.
      
 0.549
Hsdl2
Hydroxysteroid dehydrogenase like 2.
  
  
 0.533
Ilvbl
ilvB acetolactate synthase like.
  
    0.528
Hacl1
2-hydroxyacyl-CoA lyase 1.
  
    0.528
Slc39a13
Solute carrier family 39 member 13.
  
    0.521
Slc39a14
Solute carrier family 39 member 14.
  
    0.521
ENSMOCP00000008243
annotation not available
  
    0.521
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.