STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dhx37DEAH-box helicase 37. (1145 aa)    
Predicted Functional Partners:
Utp3
UTP3 small subunit processome component.
   
 0.983
Wdr46
WD repeat domain 46.
   
 0.980
Ddx49
DEAD-box helicase 49.
  
 0.977
Dcaf13
DDB1 and CUL4 associated factor 13.
   
  0.971
Krr1
KRR1 small subunit processome component homolog.
   
 0.968
Utp20
UTP20 small subunit processome component.
   
 0.967
Nop14
NOP14 nucleolar protein.
 
 
 0.967
Emg1
EMG1 N1-specific pseudouridine methyltransferase.
   
 0.967
Utp11
UTP11 small subunit processome component.
   
  0.966
Utp14b
U3 small nucleolar RNA-associated protein 14 homolog B-like.
   
 0.964
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.