STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rnps1RNA binding protein with serine rich domain 1. (305 aa)    
Predicted Functional Partners:
Eif4a3
Eukaryotic translation initiation factor 4A3.
   
 0.983
Upf2
UPF2 regulator of nonsense mediated mRNA decay.
    
 0.971
Rbm8a
RNA binding motif protein 8A.
   
0.970
Upf1
UPF1 RNA helicase and ATPase.
    
 0.963
ENSMOCP00000011887
annotation not available
   
 0.950
Sap18
Sin3A associated protein 18.
   
 0.950
ENSMOCP00000007184
annotation not available
   
 0.948
ENSMOCP00000018735
annotation not available
   
 0.948
Pnn
Pinin, desmosome associated protein.
   
 0.923
Cstf2
Cleavage stimulation factor subunit 2.
   
 0.904
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.