STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bloc1s2Biogenesis of lysosomal organelles complex 1 subunit 2. (142 aa)    
Predicted Functional Partners:
Snapin
SNAP associated protein.
   
 
 0.966
Dtnbp1
Dystrobrevin binding protein 1.
    
 
 0.957
Snx7
Sorting nexin 7.
    
 
 0.866
Bloc1s6
Biogenesis of lysosomal organelles complex 1 subunit 6.
    
 
 0.835
Borcs7
BLOC-1 related complex subunit 7.
    
 
 0.781
Borcs6
BLOC-1 related complex subunit 6.
    
 
 0.768
Bloc1s5
Biogenesis of lysosomal organelles complex 1 subunit 5.
    
 
 0.741
Snx30
Sorting nexin family member 30.
    
 
 0.710
Bloc1s3
Biogenesis of lysosomal organelles complex 1 subunit 3.
    
 
 0.690
Borcs8
BLOC-1 related complex subunit 8.
   
 
 0.633
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.