STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Resf1Retroelement silencing factor 1. (1401 aa)    
Predicted Functional Partners:
4931406P16Rik
KIAA0355 ortholog.
      
 0.570
Phc3
Polyhomeotic homolog 3.
      
 0.568
Dop1a
DOP1 leucine zipper like protein A.
      
 0.540
Dop1b
DOP1 leucine zipper like protein B.
      
 0.540
Lratd1
LRAT domain containing 1.
      
 0.539
ENSMOCP00000012469
annotation not available
  
     0.533
Nipbl
NIPBL cohesin loading factor.
   
    0.493
Csn2
Casein beta.
  
     0.489
LOC101982545
Proline-rich protein 23A3-like.
  
     0.486
Crnn
Cornulin.
  
 
   0.482
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.