STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slc22a20Solute carrier family 22 member 20, pseudogene. (556 aa)    
Predicted Functional Partners:
Suox
Sulfite oxidase.
     
 0.848
Pla2g4a
Phospholipase A2 group IVA.
    
 0.814
Slc22a7
Solute carrier family 22 member 7.
  
 
0.767
Slc22a8
Solute carrier family 22 member 8.
  
   
0.754
Ints9
Integrator complex subunit 9.
    
 0.738
Ints1
Integrator complex subunit 1.
    
 0.733
Ints11
Integrator complex subunit 11.
    
 0.731
Ints4
Integrator complex subunit 4.
    
 0.725
Ints3
Integrator complex subunit 3.
    
 0.722
Ints7
Integrator complex subunit 7.
    
 0.721
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.